Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv13-2A0A140T8N6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm10138-203ENSMUST00000206952 366 ntBASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv13-2A0A140T8N6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Idnk-204ENSMUST00000226010 1898 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm12527-201ENSMUST00000117967 564 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm13158-201ENSMUST00000122007 736 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Gm37856-201ENSMUST00000191634 999 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Trmt13-210ENSMUST00000198454 880 ntBASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv13-2A0A140T8N6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv13-2A0A140T8N6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv13-2A0A140T8N6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms