Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-6A0A075B603 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-6A0A075B603 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-6A0A075B603 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Trav6-6A0A075B603 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-6A0A075B603 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms