Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 CDV3P1-201ENST00000471403 739 ntBASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 LINC01521-201ENST00000504184 1943 ntBASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.11■□□□□ 0.65
SIMC1Q8NDZ2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIMC1Q8NDZ2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 RARRES2P4-201ENST00000514074 484 ntBASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 AC005181.1-201ENST00000604782 1256 ntBASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 FAM21FP-204ENST00000608637 956 ntBASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 MIR2861-201ENST00000636310 90 ntBASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIMC1Q8NDZ2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 AP005212.1-201ENST00000581547 1997 ntBASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIMC1Q8NDZ2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 AC026185.1-201ENST00000445748 174 ntBASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 AC093787.1-201ENST00000450396 207 ntBASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIMC1Q8NDZ2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 ID1-201ENST00000376105 1233 ntBASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 MIR663A-201ENST00000385250 93 ntBASIC19.07■□□□□ 0.64
SIMC1Q8NDZ2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms