Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smco3Q8BQM7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smco3Q8BQM7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Gm12922-201ENSMUST00000120626 809 ntBASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smco3Q8BQM7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smco3Q8BQM7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Smco3Q8BQM7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Gm27801-201ENSMUST00000184174 223 ntBASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Gm45102-201ENSMUST00000207427 857 ntBASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smco3Q8BQM7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.54□□□□□ -0.08
Smco3Q8BQM7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms