Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Q8BP99 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Q8BP99 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8BP99 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8BP99 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8BP99 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q8BP99 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q8BP99 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.36■□□□□ 0.37
Q8BP99 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.36■□□□□ 0.37
Q8BP99 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Q8BP99 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q8BP99 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Q8BP99 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Q8BP99 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Q8BP99 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.35■□□□□ 0.37
Q8BP99 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Q8BP99 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.35■□□□□ 0.37
Q8BP99 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q8BP99 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Q8BP99 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.34■□□□□ 0.37
Q8BP99 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Q8BP99 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.34■□□□□ 0.37
Q8BP99 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.34■□□□□ 0.37
Q8BP99 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Q8BP99 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q8BP99 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q8BP99 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.33■□□□□ 0.36
Q8BP99 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Gm12527-201ENSMUST00000117967 564 ntBASIC17.33■□□□□ 0.36
Q8BP99 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.33■□□□□ 0.36
Q8BP99 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.33■□□□□ 0.36
Q8BP99 Gm22325-201ENSMUST00000158904 308 ntBASIC17.33■□□□□ 0.36
Q8BP99 Rab3c-203ENSMUST00000224180 967 ntBASIC17.33■□□□□ 0.36
Q8BP99 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.33■□□□□ 0.36
Q8BP99 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.33■□□□□ 0.36
Q8BP99 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.33■□□□□ 0.36
Q8BP99 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Q8BP99 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.33■□□□□ 0.36
Q8BP99 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Q8BP99 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q8BP99 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Q8BP99 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.32■□□□□ 0.36
Q8BP99 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q8BP99 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Q8BP99 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms