Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCPP55072 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.73■■□□□ 1.07
VCPP55072 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.72■■□□□ 1.07
VCPP55072 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
VCPP55072 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.72■■□□□ 1.07
VCPP55072 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.72■■□□□ 1.07
VCPP55072 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 RPPH1-201ENST00000516869 333 ntBASIC21.72■■□□□ 1.07
VCPP55072 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.72■■□□□ 1.07
VCPP55072 AC120498.10-201ENST00000621827 505 ntBASIC21.72■■□□□ 1.07
VCPP55072 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.72■■□□□ 1.07
VCPP55072 AL157384.1-201ENST00000445995 2473 ntBASIC21.72■■□□□ 1.07
VCPP55072 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.72■■□□□ 1.07
VCPP55072 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
VCPP55072 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCPP55072 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.71■■□□□ 1.07
VCPP55072 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.71■■□□□ 1.07
VCPP55072 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.71■■□□□ 1.07
VCPP55072 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 POU5F1P4-201ENST00000413175 1085 ntBASIC21.71■■□□□ 1.07
VCPP55072 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.71■■□□□ 1.07
VCPP55072 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
VCPP55072 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.71■■□□□ 1.07
VCPP55072 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.71■■□□□ 1.07
VCPP55072 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.71■■□□□ 1.07
VCPP55072 AC008403.3-201ENST00000598924 454 ntBASIC21.71■■□□□ 1.07
VCPP55072 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.71■■□□□ 1.07
VCPP55072 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 AC010980.2-201ENST00000587099 1412 ntBASIC21.71■■□□□ 1.07
VCPP55072 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VCPP55072 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.7■■□□□ 1.06
VCPP55072 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.7■■□□□ 1.06
VCPP55072 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCPP55072 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCPP55072 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
VCPP55072 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
VCPP55072 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.7■■□□□ 1.06
VCPP55072 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCPP55072 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.7■■□□□ 1.06
VCPP55072 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.7■■□□□ 1.06
VCPP55072 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.7■■□□□ 1.06
VCPP55072 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.7■■□□□ 1.06
VCPP55072 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.7■■□□□ 1.06
VCPP55072 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VCPP55072 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
VCPP55072 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
VCPP55072 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
VCPP55072 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.69■■□□□ 1.06
VCPP55072 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.69■■□□□ 1.06
VCPP55072 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.69■■□□□ 1.06
VCPP55072 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 C1QBPP2-201ENST00000528754 825 ntBASIC21.69■■□□□ 1.06
VCPP55072 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.69■■□□□ 1.06
VCPP55072 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VCPP55072 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
VCPP55072 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VCPP55072 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.68■■□□□ 1.06
VCPP55072 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VCPP55072 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VCPP55072 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.68■■□□□ 1.06
VCPP55072 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.68■■□□□ 1.06
VCPP55072 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.68■■□□□ 1.06
VCPP55072 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.68■■□□□ 1.06
VCPP55072 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
VCPP55072 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
VCPP55072 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VCPP55072 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms