Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.19□□□□□ -0.62
P06320 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
P06320 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P06320 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P06320 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
P06320 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
P06320 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.18□□□□□ -0.62
P06320 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P06320 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
P06320 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
P06320 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.17□□□□□ -0.62
P06320 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.17□□□□□ -0.62
P06320 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
P06320 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
P06320 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
P06320 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
P06320 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
P06320 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.16□□□□□ -0.62
P06320 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P06320 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.16□□□□□ -0.62
P06320 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
P06320 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.16□□□□□ -0.62
P06320 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
P06320 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms