Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.58■□□□□ 0.89
SMAD6O43541 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD6O43541 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.58■□□□□ 0.89
SMAD6O43541 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.58■□□□□ 0.89
SMAD6O43541 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.58■□□□□ 0.89
SMAD6O43541 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD6O43541 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD6O43541 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD6O43541 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD6O43541 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.57■□□□□ 0.88
SMAD6O43541 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SMAD6O43541 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD6O43541 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD6O43541 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 AC008403.3-201ENST00000598924 454 ntBASIC20.57■□□□□ 0.88
SMAD6O43541 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD6O43541 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD6O43541 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.57■□□□□ 0.88
SMAD6O43541 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD6O43541 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD6O43541 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SMAD6O43541 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.56■□□□□ 0.88
SMAD6O43541 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD6O43541 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.56■□□□□ 0.88
SMAD6O43541 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD6O43541 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.56■□□□□ 0.88
SMAD6O43541 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD6O43541 TMEM191A-211ENST00000637163 1067 ntBASIC20.56■□□□□ 0.88
SMAD6O43541 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD6O43541 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD6O43541 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD6O43541 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMAD6O43541 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 AC026366.1-201ENST00000488803 879 ntBASIC20.55■□□□□ 0.88
SMAD6O43541 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD6O43541 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMAD6O43541 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD6O43541 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD6O43541 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD6O43541 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD6O43541 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD6O43541 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 AP003097.1-201ENST00000530657 1135 ntBASIC20.54■□□□□ 0.88
SMAD6O43541 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD6O43541 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD6O43541 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD6O43541 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.54■□□□□ 0.88
SMAD6O43541 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.53■□□□□ 0.88
SMAD6O43541 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMAD6O43541 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.53■□□□□ 0.88
SMAD6O43541 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.53■□□□□ 0.88
SMAD6O43541 SOX15-203ENST00000570788 1093 ntBASIC20.53■□□□□ 0.88
SMAD6O43541 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SMAD6O43541 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMAD6O43541 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms