Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.92■□□□□ 0.3
Clk4O35493 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.92■□□□□ 0.3
Clk4O35493 Gm10138-203ENSMUST00000206952 366 ntBASIC16.92■□□□□ 0.3
Clk4O35493 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Clk4O35493 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Clk4O35493 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
Clk4O35493 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.91■□□□□ 0.3
Clk4O35493 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clk4O35493 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clk4O35493 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Clk4O35493 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clk4O35493 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clk4O35493 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clk4O35493 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Clk4O35493 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Clk4O35493 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clk4O35493 Gm27275-201ENSMUST00000184318 272 ntBASIC16.9■□□□□ 0.3
Clk4O35493 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.9■□□□□ 0.3
Clk4O35493 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.9■□□□□ 0.3
Clk4O35493 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.9■□□□□ 0.3
Clk4O35493 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Clk4O35493 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clk4O35493 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clk4O35493 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.9■□□□□ 0.3
Clk4O35493 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clk4O35493 Tgds-204ENSMUST00000228543 1594 ntBASIC16.89■□□□□ 0.3
Clk4O35493 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.3
Clk4O35493 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clk4O35493 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clk4O35493 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk4O35493 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Clk4O35493 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clk4O35493 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk4O35493 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.89■□□□□ 0.29
Clk4O35493 Mir6349-201ENSMUST00000184059 97 ntBASIC16.89■□□□□ 0.29
Clk4O35493 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk4O35493 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk4O35493 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clk4O35493 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.88■□□□□ 0.29
Clk4O35493 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.88■□□□□ 0.29
Clk4O35493 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Gm5643-201ENSMUST00000117081 966 ntBASIC16.88■□□□□ 0.29
Clk4O35493 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clk4O35493 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clk4O35493 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clk4O35493 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.87■□□□□ 0.29
Clk4O35493 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.87■□□□□ 0.29
Clk4O35493 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.87■□□□□ 0.29
Clk4O35493 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clk4O35493 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms