Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav13n-4A0A0G2JG01 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13n-4A0A0G2JG01 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13n-4A0A0G2JG01 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13n-4A0A0G2JG01 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13n-4A0A0G2JG01 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms