Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-4A0A075B654 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.93□□□□□ -0.5
Trav3-4A0A075B654 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav3-4A0A075B654 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Gm45444-201ENSMUST00000211394 898 ntBASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-4A0A075B654 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-4A0A075B654 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms