Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 RN7SKP25-201ENST00000362449 308 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 RN7SKP110-201ENST00000410146 285 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 CTBP2P1-201ENST00000431853 245 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC068531.1-201ENST00000502398 195 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC114786.3-201ENST00000509304 705 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC021006.2-201ENST00000526978 859 ntTSL 3 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC174071.1-201ENST00000603069 517 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AL031281.2-201ENST00000606754 748 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AL121785.1-201ENST00000624745 708 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 MIR3191-201ENST00000636300 76 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AL662907.2-201ENST00000624339 3448 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 AC005722.2-201ENST00000577087 3370 ntBASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC7.87□□□□□ -1.15
NPIPA3F8WFD2 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 MAPK10-316ENST00000641430 2285 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 MIR1296-201ENST00000408136 92 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 OR52J2P-201ENST00000427973 939 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 PAICSP5-201ENST00000430406 1217 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AL441963.1-201ENST00000435137 792 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 RPS10P3-201ENST00000439253 494 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC008026.1-201ENST00000460492 447 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 ENPP7P2-201ENST00000462675 943 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC025062.1-201ENST00000465163 644 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC093249.5-201ENST00000568120 430 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 HLA-P-207ENST00000568192 747 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC243960.5-201ENST00000597858 255 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AF146191.1-201ENST00000604941 889 ntBASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
NPIPA3F8WFD2 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms