Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 POU5F1P3-201ENST00000428824 1078 ntBASIC21.57■■□□□ 1.04
CDH9Q9ULB4 FAM201B-201ENST00000458407 597 ntBASIC21.57■■□□□ 1.04
CDH9Q9ULB4 PNMA6B-201ENST00000538162 1200 ntBASIC21.57■■□□□ 1.04
CDH9Q9ULB4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.57■■□□□ 1.04
CDH9Q9ULB4 AC092368.3-202ENST00000574180 1591 ntBASIC21.57■■□□□ 1.04
CDH9Q9ULB4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH9Q9ULB4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 AC007375.3-201ENST00000600936 2314 ntBASIC21.55■■□□□ 1.04
CDH9Q9ULB4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH9Q9ULB4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH9Q9ULB4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 ESRRAP1-201ENST00000400596 1257 ntBASIC21.53■■□□□ 1.04
CDH9Q9ULB4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDH9Q9ULB4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 AC026366.1-201ENST00000488803 879 ntBASIC21.52■■□□□ 1.04
CDH9Q9ULB4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 AP003097.1-201ENST00000530657 1135 ntBASIC21.52■■□□□ 1.04
CDH9Q9ULB4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH9Q9ULB4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
CDH9Q9ULB4 AL121603.2-201ENST00000557373 2117 ntBASIC21.52■■□□□ 1.03
CDH9Q9ULB4 FP700111.2-201ENST00000619190 1892 ntBASIC21.52■■□□□ 1.03
CDH9Q9ULB4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CDH9Q9ULB4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH9Q9ULB4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH9Q9ULB4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH9Q9ULB4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH9Q9ULB4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH9Q9ULB4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms