Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ssbp1Q9CYR0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.97□□□□□ -0.33
Ssbp1Q9CYR0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.96□□□□□ -0.33
Ssbp1Q9CYR0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssbp1Q9CYR0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Gm13216-201ENSMUST00000117145 591 ntBASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssbp1Q9CYR0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms