Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Gm10418-201ENSMUST00000100943 576 ntBASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sec61bQ9CQS8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Gm10231-201ENSMUST00000181584 441 ntBASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Gm10175-202ENSMUST00000208752 441 ntBASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Sec61bQ9CQS8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Gm44544-201ENSMUST00000207052 1844 ntBASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Gm3375-201ENSMUST00000203929 796 ntBASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC9.48□□□□□ -0.89
Sec61bQ9CQS8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Ptprs-211ENSMUST00000223859 5588 ntBASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gm36991-201ENSMUST00000191800 648 ntBASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gm9694-201ENSMUST00000193347 1189 ntBASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gm18959-201ENSMUST00000208954 655 ntBASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61bQ9CQS8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms