Protein–RNA interactions for Protein: Q9CQ47

4921530L21Rik, RIKEN cDNA 4921530L21 gene, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4921530L21RikQ9CQ47 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
4921530L21RikQ9CQ47 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
4921530L21RikQ9CQ47 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Gm43173-201ENSMUST00000202246 593 ntBASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4921530L21RikQ9CQ47 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
4921530L21RikQ9CQ47 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
4921530L21RikQ9CQ47 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
4921530L21RikQ9CQ47 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4921530L21RikQ9CQ47 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
4921530L21RikQ9CQ47 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.19■□□□□ 0.34
4921530L21RikQ9CQ47 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
4921530L21RikQ9CQ47 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4921530L21RikQ9CQ47 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms