Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 AL121829.2-201ENST00000620908 328 ntBASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PCDH11XQ9BZA7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDH11XQ9BZA7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 AC026471.5-201ENST00000615068 467 ntBASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDH11XQ9BZA7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 AC011484.1-201ENST00000377652 1995 ntBASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 AC023632.3-201ENST00000521633 145 ntBASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDH11XQ9BZA7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.59■■□□□ 1.85
PCDH11XQ9BZA7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PCDH11XQ9BZA7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.58■■□□□ 1.84
PCDH11XQ9BZA7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDH11XQ9BZA7 RCN1P1-201ENST00000400413 996 ntBASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms