Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl47Q8K2Y7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl47Q8K2Y7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl47Q8K2Y7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mrpl47Q8K2Y7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mrpl47Q8K2Y7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.56■□□□□ 0.4
Mrpl47Q8K2Y7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mrpl47Q8K2Y7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mrpl47Q8K2Y7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mrpl47Q8K2Y7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl47Q8K2Y7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl47Q8K2Y7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl47Q8K2Y7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl47Q8K2Y7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms