Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srrm3Q80WV7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Srrm3Q80WV7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Gm12527-201ENSMUST00000117967 564 ntBASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Srrm3Q80WV7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Srrm3Q80WV7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Srrm3Q80WV7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Srrm3Q80WV7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Gm13168-201ENSMUST00000121771 632 ntBASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Srrm3Q80WV7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Gm10812-201ENSMUST00000099864 546 ntBASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Srrm3Q80WV7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms