Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 KRT8P36-201ENST00000489121 1440 ntBASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 AC097381.1-201ENST00000429019 1296 ntBASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.69■□□□□ 0.74
LETMD1Q6P1Q0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 AC034268.1-201ENST00000441047 882 ntBASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.68■□□□□ 0.74
LETMD1Q6P1Q0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 TCF3P1-201ENST00000423021 1937 ntBASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 AC087623.3-201ENST00000607047 1098 ntBASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LETMD1Q6P1Q0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 CDV3P1-201ENST00000471403 739 ntBASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 MIR6821-201ENST00000617625 74 ntBASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
LETMD1Q6P1Q0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
LETMD1Q6P1Q0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms