Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tpm3P21107 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tpm3P21107 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Tpm3P21107 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.87■□□□□ 0.77
Tpm3P21107 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.87■□□□□ 0.77
Tpm3P21107 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.87■□□□□ 0.77
Tpm3P21107 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tpm3P21107 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Tpm3P21107 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Gm11421-201ENSMUST00000122124 294 ntBASIC19.86■□□□□ 0.77
Tpm3P21107 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.86■□□□□ 0.77
Tpm3P21107 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.86■□□□□ 0.77
Tpm3P21107 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.86■□□□□ 0.77
Tpm3P21107 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tpm3P21107 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.85■□□□□ 0.77
Tpm3P21107 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.85■□□□□ 0.77
Tpm3P21107 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.85■□□□□ 0.77
Tpm3P21107 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tpm3P21107 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.84■□□□□ 0.77
Tpm3P21107 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.84■□□□□ 0.77
Tpm3P21107 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Tpm3P21107 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.84■□□□□ 0.77
Tpm3P21107 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Tpm3P21107 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tpm3P21107 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm3P21107 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm3P21107 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm3P21107 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tpm3P21107 Gm27801-201ENSMUST00000184174 223 ntBASIC19.83■□□□□ 0.77
Tpm3P21107 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.83■□□□□ 0.77
Tpm3P21107 Gm9847-201ENSMUST00000052528 599 ntBASIC19.83■□□□□ 0.77
Tpm3P21107 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tpm3P21107 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Tpm3P21107 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Tpm3P21107 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tpm3P21107 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tpm3P21107 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Tpm3P21107 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.82■□□□□ 0.76
Tpm3P21107 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tpm3P21107 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tpm3P21107 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms