Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPXO76031 AC133561.4-201ENST00000566112 224 ntBASIC18.43■□□□□ 0.54
CLPXO76031 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.43■□□□□ 0.54
CLPXO76031 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPXO76031 MIR4466-201ENST00000606121 54 ntBASIC18.43■□□□□ 0.54
CLPXO76031 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CLPXO76031 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 AC007613.1-201ENST00000572811 2597 ntBASIC18.43■□□□□ 0.54
CLPXO76031 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLPXO76031 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.43■□□□□ 0.54
CLPXO76031 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLPXO76031 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLPXO76031 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.42■□□□□ 0.54
CLPXO76031 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CLPXO76031 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 AC005837.3-201ENST00000612163 286 ntBASIC18.42■□□□□ 0.54
CLPXO76031 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLPXO76031 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 AC005332.8-201ENST00000622750 2735 ntBASIC18.42■□□□□ 0.54
CLPXO76031 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.42■□□□□ 0.54
CLPXO76031 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.42■□□□□ 0.54
CLPXO76031 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.41■□□□□ 0.54
CLPXO76031 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLPXO76031 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLPXO76031 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 AC096631.2-201ENST00000436136 790 ntBASIC18.41■□□□□ 0.54
CLPXO76031 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 AL512631.2-201ENST00000604634 923 ntBASIC18.41■□□□□ 0.54
CLPXO76031 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLPXO76031 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.41■□□□□ 0.54
CLPXO76031 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLPXO76031 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLPXO76031 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPXO76031 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.4■□□□□ 0.54
CLPXO76031 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.4■□□□□ 0.54
CLPXO76031 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.4■□□□□ 0.54
CLPXO76031 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLPXO76031 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLPXO76031 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLPXO76031 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLPXO76031 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPXO76031 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.39■□□□□ 0.53
CLPXO76031 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.39■□□□□ 0.53
CLPXO76031 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLPXO76031 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLPXO76031 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms