Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-1A0A0G2JEV5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-1A0A0G2JEV5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav7-1A0A0G2JEV5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav7-1A0A0G2JEV5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-1A0A0G2JEV5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms