Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-3A0A0B4J1K1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gm13216-201ENSMUST00000117145 591 ntBASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-3A0A0B4J1K1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav4-3A0A0B4J1K1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4-3A0A0B4J1K1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4-3A0A0B4J1K1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms