Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.4□□□□□ -1.23
Trim47Q8C0E3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim47Q8C0E3 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm22656-201ENSMUST00000104199 171 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm14733-201ENSMUST00000117680 133 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm13679-201ENSMUST00000118678 484 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm13245-201ENSMUST00000119646 260 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm15877-201ENSMUST00000121897 964 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm4997-201ENSMUST00000154056 360 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm6264-202ENSMUST00000162896 1217 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm24812-201ENSMUST00000175315 284 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm22911-201ENSMUST00000177920 107 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm29197-201ENSMUST00000185922 702 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm29551-201ENSMUST00000190913 698 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm4742-201ENSMUST00000200261 771 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm18423-201ENSMUST00000205144 1074 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm19033-201ENSMUST00000208516 964 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm45246-201ENSMUST00000210820 367 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm34005-201ENSMUST00000215834 282 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm18586-201ENSMUST00000217265 518 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC132121.1-201ENSMUST00000220774 332 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC155314.1-201ENSMUST00000227624 508 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim47Q8C0E3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm42551-201ENSMUST00000197701 1573 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm36963-201ENSMUST00000193506 2324 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Rnu11-201ENSMUST00000104135 134 ntBASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim47Q8C0E3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms