Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col18a1P39061 AC183268.2-201ENSMUST00000214513 446 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm7240-201ENSMUST00000220769 664 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 AC102847.2-201ENSMUST00000227799 2906 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Col18a1P39061 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm14756-201ENSMUST00000116395 240 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm14607-201ENSMUST00000119119 491 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm12807-201ENSMUST00000121546 962 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Mir1907-201ENSMUST00000122509 90 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm3496-201ENSMUST00000188283 745 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm37445-201ENSMUST00000195318 242 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm18645-201ENSMUST00000209593 651 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm18892-201ENSMUST00000217628 881 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.31□□□□□ -1.24
Col18a1P39061 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC7.31□□□□□ -1.24
Col18a1P39061 Gm45965-201ENSMUST00000221192 1284 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Gm7040-201ENSMUST00000223271 443 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 AC154627.3-201ENSMUST00000228441 334 ntBASIC7.31□□□□□ -1.24
Col18a1P39061 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Col18a1P39061 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
Col18a1P39061 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col18a1P39061 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col18a1P39061 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.3□□□□□ -1.24
Col18a1P39061 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Col18a1P39061 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 AC122887.2-201ENSMUST00000219465 1603 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm12237-201ENSMUST00000120158 470 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Gm6872-201ENSMUST00000165001 700 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col18a1P39061 Mir6907-201ENSMUST00000183764 71 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC7.3□□□□□ -1.24
Col18a1P39061 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Gm43992-201ENSMUST00000204358 197 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 AC160031.1-201ENSMUST00000219914 522 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm10704-201ENSMUST00000098952 730 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col18a1P39061 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm37761-201ENSMUST00000194989 2098 ntBASIC7.3□□□□□ -1.24
Col18a1P39061 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col18a1P39061 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col18a1P39061 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col18a1P39061 AC124426.1-203ENSMUST00000221814 1362 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col18a1P39061 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.29□□□□□ -1.24
Col18a1P39061 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC7.29□□□□□ -1.24
Col18a1P39061 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col18a1P39061 Gm10652-201ENSMUST00000199790 2622 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col18a1P39061 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col18a1P39061 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col18a1P39061 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
Col18a1P39061 Gm13131-201ENSMUST00000122228 321 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 Gm43344-201ENSMUST00000198723 1229 ntBASIC7.29□□□□□ -1.24
Col18a1P39061 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms