Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 AC069236.1-201ENST00000604339 616 ntBASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 AC008694.1-202ENST00000636953 945 ntBASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
APOBEC3DQ96AK3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 RARRES2P4-201ENST00000514074 484 ntBASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 AC016405.3-201ENST00000607710 860 ntBASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 AC080038.1-201ENST00000611274 1154 ntBASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
APOBEC3DQ96AK3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 AC004911.1-201ENST00000416316 871 ntBASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
APOBEC3DQ96AK3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 AC100791.3-201ENST00000617619 330 ntBASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 AP005212.1-201ENST00000581547 1997 ntBASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
APOBEC3DQ96AK3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
APOBEC3DQ96AK3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
APOBEC3DQ96AK3 AC087633.2-202ENST00000565166 1439 ntBASIC17.64■□□□□ 0.42
APOBEC3DQ96AK3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.64■□□□□ 0.42
APOBEC3DQ96AK3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 AL121603.2-201ENST00000557373 2117 ntBASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 LINC01521-201ENST00000504184 1943 ntBASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 AC092720.2-201ENST00000602388 1665 ntBASIC17.64■□□□□ 0.41
APOBEC3DQ96AK3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms