Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 AC125437.2-201ENST00000625180 2167 ntBASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 AC010141.2-201ENST00000452426 721 ntBASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 SUDS3P1-201ENST00000505831 966 ntBASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC44A1Q8WWI5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 AL139246.5-201ENST00000606645 996 ntBASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 AC120498.10-201ENST00000621827 505 ntBASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SLC44A1Q8WWI5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 MIR6084-201ENST00000622012 110 ntBASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC44A1Q8WWI5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC44A1Q8WWI5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 MIR638-201ENST00000385237 100 ntBASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC44A1Q8WWI5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SLC44A1Q8WWI5 IRS3P-201ENST00000223076 1006 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms