Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nle1Q8VEJ4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nle1Q8VEJ4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Gm13401-201ENSMUST00000117074 291 ntBASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nle1Q8VEJ4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Gm3375-201ENSMUST00000203929 796 ntBASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nle1Q8VEJ4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Gm4974-201ENSMUST00000209974 875 ntBASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nle1Q8VEJ4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nle1Q8VEJ4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nle1Q8VEJ4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms