Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Timm23-208ENSMUST00000226683 750 ntBASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh19Q80TF3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Gm10418-201ENSMUST00000100943 576 ntBASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh19Q80TF3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh19Q80TF3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh19Q80TF3 Tgds-204ENSMUST00000228543 1594 ntBASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh19Q80TF3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms