Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Fndc4Q3TR08 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gm13534-201ENSMUST00000121169 513 ntBASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fndc4Q3TR08 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fndc4Q3TR08 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 AV356131-201ENSMUST00000206201 750 ntBASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fndc4Q3TR08 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fndc4Q3TR08 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Gm10849-201ENSMUST00000100397 618 ntBASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fndc4Q3TR08 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms