Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ube2d3P61079 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ube2d3P61079 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ube2d3P61079 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ube2d3P61079 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.72□□□□□ -0.37
Ube2d3P61079 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Gm22325-201ENSMUST00000158904 308 ntBASIC12.71□□□□□ -0.37
Ube2d3P61079 Gm6420-201ENSMUST00000193885 723 ntBASIC12.71□□□□□ -0.37
Ube2d3P61079 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.71□□□□□ -0.37
Ube2d3P61079 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ube2d3P61079 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube2d3P61079 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube2d3P61079 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube2d3P61079 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube2d3P61079 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ube2d3P61079 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ube2d3P61079 Nespas-201ENSMUST00000143738 1083 ntBASIC12.7□□□□□ -0.38
Ube2d3P61079 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ube2d3P61079 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ube2d3P61079 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.7□□□□□ -0.38
Ube2d3P61079 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ube2d3P61079 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ube2d3P61079 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ube2d3P61079 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ube2d3P61079 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ube2d3P61079 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ube2d3P61079 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ube2d3P61079 Gm7514-201ENSMUST00000209475 934 ntBASIC12.68□□□□□ -0.38
Ube2d3P61079 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.68□□□□□ -0.38
Ube2d3P61079 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ube2d3P61079 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms