Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN8P56748 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN8P56748 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN8P56748 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN8P56748 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN8P56748 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 KRT18P14-201ENST00000534205 1250 ntBASIC19.41■□□□□ 0.7
CLDN8P56748 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN8P56748 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLDN8P56748 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN8P56748 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN8P56748 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN8P56748 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.41■□□□□ 0.7
CLDN8P56748 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN8P56748 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN8P56748 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN8P56748 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN8P56748 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 AC004854.2-201ENST00000608450 1441 ntBASIC19.41■□□□□ 0.7
CLDN8P56748 TCF3P1-201ENST00000423021 1937 ntBASIC19.41■□□□□ 0.7
CLDN8P56748 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN8P56748 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN8P56748 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN8P56748 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN8P56748 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN8P56748 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN8P56748 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN8P56748 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN8P56748 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN8P56748 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN8P56748 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLDN8P56748 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN8P56748 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CLDN8P56748 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN8P56748 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLDN8P56748 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.39■□□□□ 0.7
CLDN8P56748 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.39■□□□□ 0.7
CLDN8P56748 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 AC007322.3-201ENST00000426526 701 ntBASIC19.39■□□□□ 0.69
CLDN8P56748 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN8P56748 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN8P56748 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 KRT8P36-201ENST00000489121 1440 ntBASIC19.39■□□□□ 0.69
CLDN8P56748 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN8P56748 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN8P56748 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN8P56748 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN8P56748 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN8P56748 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.38■□□□□ 0.69
CLDN8P56748 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN8P56748 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN8P56748 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.38■□□□□ 0.69
CLDN8P56748 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN8P56748 SMG8-203ENST00000578922 2178 ntBASIC19.38■□□□□ 0.69
CLDN8P56748 AC019069.1-201ENST00000610008 1333 ntBASIC19.38■□□□□ 0.69
CLDN8P56748 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CLDN8P56748 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CLDN8P56748 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN8P56748 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN8P56748 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN8P56748 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN8P56748 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.37■□□□□ 0.69
CLDN8P56748 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.37■□□□□ 0.69
CLDN8P56748 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN8P56748 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN8P56748 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN8P56748 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN8P56748 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN8P56748 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN8P56748 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms