Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Becn1O88597 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Becn1O88597 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.34■□□□□ 0.85
Becn1O88597 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Becn1O88597 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Becn1O88597 Smad6-203ENSMUST00000179458 273 ntBASIC20.34■□□□□ 0.85
Becn1O88597 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Becn1O88597 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.33■□□□□ 0.85
Becn1O88597 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Becn1O88597 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Becn1O88597 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Becn1O88597 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Becn1O88597 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Becn1O88597 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.33■□□□□ 0.85
Becn1O88597 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.33■□□□□ 0.84
Becn1O88597 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Becn1O88597 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Becn1O88597 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Becn1O88597 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Becn1O88597 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Becn1O88597 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.32■□□□□ 0.84
Becn1O88597 Gm26833-201ENSMUST00000180899 440 ntBASIC20.32■□□□□ 0.84
Becn1O88597 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Becn1O88597 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.32■□□□□ 0.84
Becn1O88597 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Becn1O88597 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Becn1O88597 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Becn1O88597 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.31■□□□□ 0.84
Becn1O88597 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Becn1O88597 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Becn1O88597 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.3■□□□□ 0.84
Becn1O88597 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Becn1O88597 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Becn1O88597 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Becn1O88597 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Becn1O88597 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Becn1O88597 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Becn1O88597 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.28■□□□□ 0.84
Becn1O88597 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Becn1O88597 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Becn1O88597 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Becn1O88597 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Becn1O88597 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.27■□□□□ 0.84
Becn1O88597 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms