Protein–RNA interactions for Protein: O35914

Bnc1, Zinc finger protein basonuclin-1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bnc1O35914 Gm8309-201ENSMUST00000206627 1448 ntBASIC18■□□□□ 0.47
Bnc1O35914 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18■□□□□ 0.47
Bnc1O35914 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18■□□□□ 0.47
Bnc1O35914 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Bnc1O35914 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Bnc1O35914 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Bnc1O35914 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Bnc1O35914 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.99■□□□□ 0.47
Bnc1O35914 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.99■□□□□ 0.47
Bnc1O35914 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Bnc1O35914 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.99■□□□□ 0.47
Bnc1O35914 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Bnc1O35914 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Bnc1O35914 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Bnc1O35914 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Bnc1O35914 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Gm15375-201ENSMUST00000119510 849 ntBASIC17.98■□□□□ 0.47
Bnc1O35914 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.98■□□□□ 0.47
Bnc1O35914 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.98■□□□□ 0.47
Bnc1O35914 Gm30025-201ENSMUST00000218555 728 ntBASIC17.98■□□□□ 0.47
Bnc1O35914 Odf3b-204ENSMUST00000227834 930 ntBASIC17.98■□□□□ 0.47
Bnc1O35914 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Bnc1O35914 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Bnc1O35914 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.98■□□□□ 0.47
Bnc1O35914 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.97■□□□□ 0.47
Bnc1O35914 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Gm18025-201ENSMUST00000221733 862 ntBASIC17.97■□□□□ 0.47
Bnc1O35914 Mtag2-201ENSMUST00000058665 714 ntBASIC17.97■□□□□ 0.47
Bnc1O35914 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Bnc1O35914 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Bnc1O35914 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Bnc1O35914 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Bnc1O35914 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.96■□□□□ 0.47
Bnc1O35914 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Bnc1O35914 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.96■□□□□ 0.47
Bnc1O35914 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Bnc1O35914 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Bnc1O35914 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.96■□□□□ 0.47
Bnc1O35914 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Bnc1O35914 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Bnc1O35914 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.95■□□□□ 0.46
Bnc1O35914 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.95■□□□□ 0.46
Bnc1O35914 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
Bnc1O35914 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Bnc1O35914 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.95■□□□□ 0.46
Bnc1O35914 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Bnc1O35914 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Bnc1O35914 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Bnc1O35914 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Bnc1O35914 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.94■□□□□ 0.46
Bnc1O35914 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.94■□□□□ 0.46
Bnc1O35914 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.94■□□□□ 0.46
Bnc1O35914 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.94■□□□□ 0.46
Bnc1O35914 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Bnc1O35914 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Bnc1O35914 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Bnc1O35914 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms