Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16d-dv11A0A075B617 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16d-dv11A0A075B617 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16d-dv11A0A075B617 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16d-dv11A0A075B617 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms