Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccr9Q9WUT7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccr9Q9WUT7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr9Q9WUT7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccr9Q9WUT7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccr9Q9WUT7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Ccr9Q9WUT7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr9Q9WUT7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccr9Q9WUT7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr9Q9WUT7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccr9Q9WUT7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr9Q9WUT7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr9Q9WUT7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccr9Q9WUT7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr9Q9WUT7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr9Q9WUT7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccr9Q9WUT7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Ccr9Q9WUT7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr9Q9WUT7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr9Q9WUT7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr9Q9WUT7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccr9Q9WUT7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21■□□□□ 0.95
Ccr9Q9WUT7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21■□□□□ 0.95
Ccr9Q9WUT7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr9Q9WUT7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr9Q9WUT7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr9Q9WUT7 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.97■□□□□ 0.95
Ccr9Q9WUT7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr9Q9WUT7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr9Q9WUT7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr9Q9WUT7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr9Q9WUT7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr9Q9WUT7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr9Q9WUT7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr9Q9WUT7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr9Q9WUT7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccr9Q9WUT7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr9Q9WUT7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr9Q9WUT7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccr9Q9WUT7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr9Q9WUT7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr9Q9WUT7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccr9Q9WUT7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccr9Q9WUT7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ccr9Q9WUT7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ccr9Q9WUT7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr9Q9WUT7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr9Q9WUT7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccr9Q9WUT7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccr9Q9WUT7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr9Q9WUT7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.84■□□□□ 0.93
Ccr9Q9WUT7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccr9Q9WUT7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccr9Q9WUT7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccr9Q9WUT7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccr9Q9WUT7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr9Q9WUT7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr9Q9WUT7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Zfp131-205ENSMUST00000223812 663 ntBASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr9Q9WUT7 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.79■□□□□ 0.92
Ccr9Q9WUT7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccr9Q9WUT7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr9Q9WUT7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.78■□□□□ 0.92
Ccr9Q9WUT7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccr9Q9WUT7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccr9Q9WUT7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccr9Q9WUT7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ccr9Q9WUT7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccr9Q9WUT7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccr9Q9WUT7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccr9Q9WUT7 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.74■□□□□ 0.91
Ccr9Q9WUT7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccr9Q9WUT7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccr9Q9WUT7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccr9Q9WUT7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccr9Q9WUT7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccr9Q9WUT7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccr9Q9WUT7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccr9Q9WUT7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccr9Q9WUT7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccr9Q9WUT7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr9Q9WUT7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr9Q9WUT7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccr9Q9WUT7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr9Q9WUT7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccr9Q9WUT7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ccr9Q9WUT7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccr9Q9WUT7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr9Q9WUT7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccr9Q9WUT7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccr9Q9WUT7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms