Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Scn5aQ9JJV9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.02■■□□□ 1.76
Scn5aQ9JJV9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.01■■□□□ 1.75
Scn5aQ9JJV9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26■■□□□ 1.75
Scn5aQ9JJV9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Scn5aQ9JJV9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Scn5aQ9JJV9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.96■■□□□ 1.75
Scn5aQ9JJV9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn5aQ9JJV9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Scn5aQ9JJV9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn5aQ9JJV9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn5aQ9JJV9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn5aQ9JJV9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Scn5aQ9JJV9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.93■■□□□ 1.74
Scn5aQ9JJV9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn5aQ9JJV9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn5aQ9JJV9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scn5aQ9JJV9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Scn5aQ9JJV9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Scn5aQ9JJV9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn5aQ9JJV9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn5aQ9JJV9 Gm11175-201ENSMUST00000116172 543 ntBASIC25.9■■□□□ 1.74
Scn5aQ9JJV9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Scn5aQ9JJV9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Scn5aQ9JJV9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.89■■□□□ 1.74
Scn5aQ9JJV9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Scn5aQ9JJV9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Scn5aQ9JJV9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn5aQ9JJV9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn5aQ9JJV9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn5aQ9JJV9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.88■■□□□ 1.73
Scn5aQ9JJV9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scn5aQ9JJV9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scn5aQ9JJV9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Scn5aQ9JJV9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Scn5aQ9JJV9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.87■■□□□ 1.73
Scn5aQ9JJV9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Scn5aQ9JJV9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.86■■□□□ 1.73
Scn5aQ9JJV9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Scn5aQ9JJV9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
Scn5aQ9JJV9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Scn5aQ9JJV9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Scn5aQ9JJV9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Scn5aQ9JJV9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Scn5aQ9JJV9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.83■■□□□ 1.73
Scn5aQ9JJV9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Scn5aQ9JJV9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Scn5aQ9JJV9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Scn5aQ9JJV9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
Scn5aQ9JJV9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Scn5aQ9JJV9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Scn5aQ9JJV9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Scn5aQ9JJV9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Scn5aQ9JJV9 Mir6538-201ENSMUST00000183713 110 ntBASIC25.79■■□□□ 1.72
Scn5aQ9JJV9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Scn5aQ9JJV9 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.78■■□□□ 1.72
Scn5aQ9JJV9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.78■■□□□ 1.72
Scn5aQ9JJV9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Scn5aQ9JJV9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Scn5aQ9JJV9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Scn5aQ9JJV9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn5aQ9JJV9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Scn5aQ9JJV9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Scn5aQ9JJV9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn5aQ9JJV9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.73■■□□□ 1.71
Scn5aQ9JJV9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scn5aQ9JJV9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.72■■□□□ 1.71
Scn5aQ9JJV9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Scn5aQ9JJV9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scn5aQ9JJV9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.7■■□□□ 1.7
Scn5aQ9JJV9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn5aQ9JJV9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.69■■□□□ 1.7
Scn5aQ9JJV9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scn5aQ9JJV9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scn5aQ9JJV9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.66■■□□□ 1.7
Scn5aQ9JJV9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Scn5aQ9JJV9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn5aQ9JJV9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Scn5aQ9JJV9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Scn5aQ9JJV9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn5aQ9JJV9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn5aQ9JJV9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn5aQ9JJV9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Scn5aQ9JJV9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.6■■□□□ 1.69
Scn5aQ9JJV9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Scn5aQ9JJV9 Gm6311-201ENSMUST00000073790 878 ntBASIC25.59■■□□□ 1.69
Scn5aQ9JJV9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Scn5aQ9JJV9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scn5aQ9JJV9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.58■■□□□ 1.69
Scn5aQ9JJV9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.58■■□□□ 1.69
Scn5aQ9JJV9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Scn5aQ9JJV9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scn5aQ9JJV9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scn5aQ9JJV9 Cap2-205ENSMUST00000225824 1634 ntBASIC25.57■■□□□ 1.68
Scn5aQ9JJV9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Scn5aQ9JJV9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Scn5aQ9JJV9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scn5aQ9JJV9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Scn5aQ9JJV9 Gm30023-201ENSMUST00000197970 889 ntBASIC25.56■■□□□ 1.68
Scn5aQ9JJV9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms