Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rrp8Q9DB85 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.18■■□□□ 1.46
Rrp8Q9DB85 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.18■■□□□ 1.46
Rrp8Q9DB85 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rrp8Q9DB85 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.16■■□□□ 1.46
Rrp8Q9DB85 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.16■■□□□ 1.46
Rrp8Q9DB85 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.15■■□□□ 1.46
Rrp8Q9DB85 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.15■■□□□ 1.46
Rrp8Q9DB85 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rrp8Q9DB85 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.15■■□□□ 1.46
Rrp8Q9DB85 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rrp8Q9DB85 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rrp8Q9DB85 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rrp8Q9DB85 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rrp8Q9DB85 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rrp8Q9DB85 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
Rrp8Q9DB85 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rrp8Q9DB85 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rrp8Q9DB85 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rrp8Q9DB85 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rrp8Q9DB85 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.1■■□□□ 1.45
Rrp8Q9DB85 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rrp8Q9DB85 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rrp8Q9DB85 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rrp8Q9DB85 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rrp8Q9DB85 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.05■■□□□ 1.44
Rrp8Q9DB85 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rrp8Q9DB85 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rrp8Q9DB85 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Rrp8Q9DB85 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.03■■□□□ 1.44
Rrp8Q9DB85 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.03■■□□□ 1.44
Rrp8Q9DB85 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rrp8Q9DB85 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rrp8Q9DB85 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rrp8Q9DB85 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.01■■□□□ 1.43
Rrp8Q9DB85 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Rrp8Q9DB85 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24■■□□□ 1.43
Rrp8Q9DB85 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rrp8Q9DB85 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
Rrp8Q9DB85 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rrp8Q9DB85 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rrp8Q9DB85 Mir6538-201ENSMUST00000183713 110 ntBASIC23.99■■□□□ 1.43
Rrp8Q9DB85 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rrp8Q9DB85 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rrp8Q9DB85 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rrp8Q9DB85 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Rrp8Q9DB85 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rrp8Q9DB85 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rrp8Q9DB85 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rrp8Q9DB85 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rrp8Q9DB85 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.43
Rrp8Q9DB85 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.95■■□□□ 1.42
Rrp8Q9DB85 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rrp8Q9DB85 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rrp8Q9DB85 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rrp8Q9DB85 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Rrp8Q9DB85 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rrp8Q9DB85 Gm11175-201ENSMUST00000116172 543 ntBASIC23.91■■□□□ 1.42
Rrp8Q9DB85 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rrp8Q9DB85 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.9■■□□□ 1.42
Rrp8Q9DB85 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rrp8Q9DB85 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rrp8Q9DB85 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rrp8Q9DB85 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rrp8Q9DB85 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rrp8Q9DB85 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Rrp8Q9DB85 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rrp8Q9DB85 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rrp8Q9DB85 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rrp8Q9DB85 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.87■■□□□ 1.41
Rrp8Q9DB85 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rrp8Q9DB85 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Rrp8Q9DB85 Gm6311-201ENSMUST00000073790 878 ntBASIC23.87■■□□□ 1.41
Rrp8Q9DB85 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.86■■□□□ 1.41
Rrp8Q9DB85 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Rrp8Q9DB85 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Rrp8Q9DB85 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rrp8Q9DB85 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.84■■□□□ 1.41
Rrp8Q9DB85 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rrp8Q9DB85 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rrp8Q9DB85 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rrp8Q9DB85 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rrp8Q9DB85 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.82■■□□□ 1.4
Rrp8Q9DB85 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rrp8Q9DB85 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rrp8Q9DB85 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.8■■□□□ 1.4
Rrp8Q9DB85 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rrp8Q9DB85 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rrp8Q9DB85 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Rrp8Q9DB85 Particl-201ENSMUST00000205370 1560 ntBASIC23.78■■□□□ 1.4
Rrp8Q9DB85 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rrp8Q9DB85 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Rrp8Q9DB85 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rrp8Q9DB85 Gm30023-201ENSMUST00000197970 889 ntBASIC23.77■■□□□ 1.4
Rrp8Q9DB85 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rrp8Q9DB85 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rrp8Q9DB85 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Rrp8Q9DB85 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rrp8Q9DB85 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rrp8Q9DB85 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms