Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
U2af1Q9D883 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
U2af1Q9D883 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.39■■■□□ 2.78
U2af1Q9D883 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32.38■■■□□ 2.77
U2af1Q9D883 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
U2af1Q9D883 Gm43445-201ENSMUST00000198564 2091 ntBASIC32.36■■■□□ 2.77
U2af1Q9D883 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
U2af1Q9D883 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
U2af1Q9D883 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
U2af1Q9D883 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
U2af1Q9D883 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
U2af1Q9D883 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
U2af1Q9D883 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
U2af1Q9D883 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32.31■■■□□ 2.76
U2af1Q9D883 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
U2af1Q9D883 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.3■■■□□ 2.76
U2af1Q9D883 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
U2af1Q9D883 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
U2af1Q9D883 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
U2af1Q9D883 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
U2af1Q9D883 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
U2af1Q9D883 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
U2af1Q9D883 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
U2af1Q9D883 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
U2af1Q9D883 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
U2af1Q9D883 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.26■■■□□ 2.75
U2af1Q9D883 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.26■■■□□ 2.75
U2af1Q9D883 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
U2af1Q9D883 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
U2af1Q9D883 Gm6821-201ENSMUST00000107540 542 ntBASIC32.25■■■□□ 2.75
U2af1Q9D883 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
U2af1Q9D883 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
U2af1Q9D883 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
U2af1Q9D883 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC32.24■■■□□ 2.75
U2af1Q9D883 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
U2af1Q9D883 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
U2af1Q9D883 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
U2af1Q9D883 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
U2af1Q9D883 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
U2af1Q9D883 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
U2af1Q9D883 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
U2af1Q9D883 Gm8503-201ENSMUST00000118131 455 ntBASIC32.18■■■□□ 2.74
U2af1Q9D883 Nkain2-201ENSMUST00000092602 558 ntBASIC32.18■■■□□ 2.74
U2af1Q9D883 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
U2af1Q9D883 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
U2af1Q9D883 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
U2af1Q9D883 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
U2af1Q9D883 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
U2af1Q9D883 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
U2af1Q9D883 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
U2af1Q9D883 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
U2af1Q9D883 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.15■■■□□ 2.74
U2af1Q9D883 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
U2af1Q9D883 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
U2af1Q9D883 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.14■■■□□ 2.74
U2af1Q9D883 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
U2af1Q9D883 Gm9905-201ENSMUST00000065740 1845 ntBASIC32.13■■■□□ 2.73
U2af1Q9D883 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
U2af1Q9D883 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
U2af1Q9D883 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
U2af1Q9D883 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
U2af1Q9D883 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.1■■■□□ 2.73
U2af1Q9D883 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
U2af1Q9D883 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
U2af1Q9D883 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.09■■■□□ 2.73
U2af1Q9D883 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
U2af1Q9D883 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
U2af1Q9D883 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
U2af1Q9D883 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
U2af1Q9D883 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
U2af1Q9D883 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
U2af1Q9D883 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
U2af1Q9D883 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
U2af1Q9D883 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
U2af1Q9D883 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.05■■■□□ 2.72
U2af1Q9D883 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
U2af1Q9D883 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
U2af1Q9D883 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC32.03■■■□□ 2.72
U2af1Q9D883 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.03■■■□□ 2.72
U2af1Q9D883 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
U2af1Q9D883 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC32.02■■■□□ 2.72
U2af1Q9D883 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC32.02■■■□□ 2.72
U2af1Q9D883 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
U2af1Q9D883 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32■■■□□ 2.71
U2af1Q9D883 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
U2af1Q9D883 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.98■■■□□ 2.71
U2af1Q9D883 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
U2af1Q9D883 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.97■■■□□ 2.71
U2af1Q9D883 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.96■■■□□ 2.71
U2af1Q9D883 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.7
U2af1Q9D883 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.93■■■□□ 2.7
U2af1Q9D883 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
U2af1Q9D883 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.91■■■□□ 2.7
U2af1Q9D883 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
U2af1Q9D883 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
U2af1Q9D883 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.89■■■□□ 2.7
U2af1Q9D883 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
U2af1Q9D883 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
U2af1Q9D883 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.88■■■□□ 2.69
U2af1Q9D883 Amer2-203ENSMUST00000225247 2662 ntBASIC31.88■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms