Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssbp1Q9CYR0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ssbp1Q9CYR0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ssbp1Q9CYR0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssbp1Q9CYR0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssbp1Q9CYR0 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.74■□□□□ 0.43
Ssbp1Q9CYR0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssbp1Q9CYR0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssbp1Q9CYR0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssbp1Q9CYR0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssbp1Q9CYR0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssbp1Q9CYR0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssbp1Q9CYR0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Ssbp1Q9CYR0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssbp1Q9CYR0 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.71■□□□□ 0.43
Ssbp1Q9CYR0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Ssbp1Q9CYR0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp1Q9CYR0 Gm27325-201ENSMUST00000175467 74 ntBASIC17.69■□□□□ 0.42
Ssbp1Q9CYR0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp1Q9CYR0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssbp1Q9CYR0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssbp1Q9CYR0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp1Q9CYR0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp1Q9CYR0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp1Q9CYR0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp1Q9CYR0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssbp1Q9CYR0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssbp1Q9CYR0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssbp1Q9CYR0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssbp1Q9CYR0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp1Q9CYR0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssbp1Q9CYR0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ssbp1Q9CYR0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssbp1Q9CYR0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssbp1Q9CYR0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp1Q9CYR0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp1Q9CYR0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssbp1Q9CYR0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssbp1Q9CYR0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp1Q9CYR0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp1Q9CYR0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ssbp1Q9CYR0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp1Q9CYR0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssbp1Q9CYR0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Ssbp1Q9CYR0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp1Q9CYR0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssbp1Q9CYR0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp1Q9CYR0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp1Q9CYR0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssbp1Q9CYR0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssbp1Q9CYR0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssbp1Q9CYR0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ssbp1Q9CYR0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.58■□□□□ 0.41
Ssbp1Q9CYR0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Ssbp1Q9CYR0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ssbp1Q9CYR0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ssbp1Q9CYR0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssbp1Q9CYR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp1Q9CYR0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssbp1Q9CYR0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ssbp1Q9CYR0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ssbp1Q9CYR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp1Q9CYR0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp1Q9CYR0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssbp1Q9CYR0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.54■□□□□ 0.4
Ssbp1Q9CYR0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssbp1Q9CYR0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp1Q9CYR0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssbp1Q9CYR0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.52■□□□□ 0.4
Ssbp1Q9CYR0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.52■□□□□ 0.4
Ssbp1Q9CYR0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp1Q9CYR0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssbp1Q9CYR0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ssbp1Q9CYR0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssbp1Q9CYR0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp1Q9CYR0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp1Q9CYR0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp1Q9CYR0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp1Q9CYR0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssbp1Q9CYR0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp1Q9CYR0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssbp1Q9CYR0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssbp1Q9CYR0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp1Q9CYR0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ssbp1Q9CYR0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssbp1Q9CYR0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ssbp1Q9CYR0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms