Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H2afb1Q9CQ70 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1Q9CQ70 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1Q9CQ70 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H2afb1Q9CQ70 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1Q9CQ70 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H2afb1Q9CQ70 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1Q9CQ70 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1Q9CQ70 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H2afb1Q9CQ70 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
H2afb1Q9CQ70 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H2afb1Q9CQ70 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb1Q9CQ70 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
H2afb1Q9CQ70 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H2afb1Q9CQ70 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H2afb1Q9CQ70 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
H2afb1Q9CQ70 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1Q9CQ70 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.8■□□□□ 0.76
H2afb1Q9CQ70 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1Q9CQ70 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
H2afb1Q9CQ70 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2afb1Q9CQ70 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb1Q9CQ70 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2afb1Q9CQ70 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2afb1Q9CQ70 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.78■□□□□ 0.76
H2afb1Q9CQ70 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1Q9CQ70 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1Q9CQ70 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1Q9CQ70 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1Q9CQ70 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
H2afb1Q9CQ70 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb1Q9CQ70 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb1Q9CQ70 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.73■□□□□ 0.75
H2afb1Q9CQ70 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb1Q9CQ70 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb1Q9CQ70 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb1Q9CQ70 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.71■□□□□ 0.75
H2afb1Q9CQ70 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Zfp131-205ENSMUST00000223812 663 ntBASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb1Q9CQ70 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
H2afb1Q9CQ70 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1Q9CQ70 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
H2afb1Q9CQ70 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1Q9CQ70 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
H2afb1Q9CQ70 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb1Q9CQ70 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.67■□□□□ 0.74
H2afb1Q9CQ70 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1Q9CQ70 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1Q9CQ70 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb1Q9CQ70 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb1Q9CQ70 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.65■□□□□ 0.74
H2afb1Q9CQ70 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.64■□□□□ 0.73
H2afb1Q9CQ70 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1Q9CQ70 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1Q9CQ70 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1Q9CQ70 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1Q9CQ70 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
H2afb1Q9CQ70 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb1Q9CQ70 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
H2afb1Q9CQ70 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.61■□□□□ 0.73
H2afb1Q9CQ70 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
H2afb1Q9CQ70 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1Q9CQ70 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.6■□□□□ 0.73
H2afb1Q9CQ70 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afb1Q9CQ70 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.59■□□□□ 0.73
H2afb1Q9CQ70 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1Q9CQ70 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1Q9CQ70 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
H2afb1Q9CQ70 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H2afb1Q9CQ70 Gm9397-201ENSMUST00000200125 605 ntBASIC19.58■□□□□ 0.72
H2afb1Q9CQ70 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1Q9CQ70 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1Q9CQ70 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1Q9CQ70 Gm24970-201ENSMUST00000175582 82 ntBASIC19.57■□□□□ 0.72
H2afb1Q9CQ70 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.57■□□□□ 0.72
H2afb1Q9CQ70 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1Q9CQ70 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1Q9CQ70 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
H2afb1Q9CQ70 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1Q9CQ70 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.56■□□□□ 0.72
H2afb1Q9CQ70 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
H2afb1Q9CQ70 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1Q9CQ70 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
H2afb1Q9CQ70 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.55■□□□□ 0.72
H2afb1Q9CQ70 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
H2afb1Q9CQ70 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1Q9CQ70 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
H2afb1Q9CQ70 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
H2afb1Q9CQ70 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
H2afb1Q9CQ70 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
H2afb1Q9CQ70 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms