Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl54Q9CPW3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.67■■□□□ 1.06
Mrpl54Q9CPW3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Mrpl54Q9CPW3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl54Q9CPW3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mrpl54Q9CPW3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.63■■□□□ 1.05
Mrpl54Q9CPW3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl54Q9CPW3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl54Q9CPW3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl54Q9CPW3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Mrpl54Q9CPW3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mrpl54Q9CPW3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Mrpl54Q9CPW3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Mrpl54Q9CPW3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.58■■□□□ 1.05
Mrpl54Q9CPW3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Mrpl54Q9CPW3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mrpl54Q9CPW3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mrpl54Q9CPW3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Mrpl54Q9CPW3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.54■■□□□ 1.04
Mrpl54Q9CPW3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mrpl54Q9CPW3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Mrpl54Q9CPW3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Mrpl54Q9CPW3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mrpl54Q9CPW3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mrpl54Q9CPW3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mrpl54Q9CPW3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.48■■□□□ 1.03
Mrpl54Q9CPW3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Mrpl54Q9CPW3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mrpl54Q9CPW3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mrpl54Q9CPW3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.44■■□□□ 1.02
Mrpl54Q9CPW3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mrpl54Q9CPW3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mrpl54Q9CPW3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mrpl54Q9CPW3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mrpl54Q9CPW3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mrpl54Q9CPW3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mrpl54Q9CPW3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mrpl54Q9CPW3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mrpl54Q9CPW3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mrpl54Q9CPW3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Mrpl54Q9CPW3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.35■■□□□ 1.01
Mrpl54Q9CPW3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Mrpl54Q9CPW3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms