Protein–RNA interactions for Protein: Q99J23

Ghdc, GH3 domain-containing protein, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GhdcQ99J23 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GhdcQ99J23 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
GhdcQ99J23 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.52■■□□□ 1.84
GhdcQ99J23 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.52■■□□□ 1.84
GhdcQ99J23 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
GhdcQ99J23 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.51■■□□□ 1.83
GhdcQ99J23 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
GhdcQ99J23 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
GhdcQ99J23 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
GhdcQ99J23 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GhdcQ99J23 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.49■■□□□ 1.83
GhdcQ99J23 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
GhdcQ99J23 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.47■■□□□ 1.83
GhdcQ99J23 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
GhdcQ99J23 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
GhdcQ99J23 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
GhdcQ99J23 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
GhdcQ99J23 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
GhdcQ99J23 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GhdcQ99J23 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
GhdcQ99J23 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
GhdcQ99J23 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.42■■□□□ 1.82
GhdcQ99J23 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
GhdcQ99J23 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.41■■□□□ 1.82
GhdcQ99J23 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
GhdcQ99J23 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
GhdcQ99J23 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.38■■□□□ 1.81
GhdcQ99J23 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GhdcQ99J23 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
GhdcQ99J23 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GhdcQ99J23 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
GhdcQ99J23 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.37■■□□□ 1.81
GhdcQ99J23 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.36■■□□□ 1.81
GhdcQ99J23 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
GhdcQ99J23 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
GhdcQ99J23 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
GhdcQ99J23 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.35■■□□□ 1.81
GhdcQ99J23 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
GhdcQ99J23 Gm11175-201ENSMUST00000116172 543 ntBASIC26.33■■□□□ 1.81
GhdcQ99J23 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
GhdcQ99J23 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
GhdcQ99J23 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
GhdcQ99J23 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GhdcQ99J23 Mir6538-201ENSMUST00000183713 110 ntBASIC26.31■■□□□ 1.8
GhdcQ99J23 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GhdcQ99J23 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
GhdcQ99J23 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GhdcQ99J23 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
GhdcQ99J23 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
GhdcQ99J23 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.27■■□□□ 1.8
GhdcQ99J23 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
GhdcQ99J23 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GhdcQ99J23 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.27■■□□□ 1.8
GhdcQ99J23 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GhdcQ99J23 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
GhdcQ99J23 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
GhdcQ99J23 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GhdcQ99J23 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
GhdcQ99J23 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
GhdcQ99J23 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
GhdcQ99J23 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
GhdcQ99J23 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
GhdcQ99J23 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
GhdcQ99J23 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
GhdcQ99J23 Gm6311-201ENSMUST00000073790 878 ntBASIC26.19■■□□□ 1.78
GhdcQ99J23 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.19■■□□□ 1.78
GhdcQ99J23 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
GhdcQ99J23 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
GhdcQ99J23 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
GhdcQ99J23 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
GhdcQ99J23 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.15■■□□□ 1.78
GhdcQ99J23 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
GhdcQ99J23 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.15■■□□□ 1.78
GhdcQ99J23 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
GhdcQ99J23 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
GhdcQ99J23 Cap2-205ENSMUST00000225824 1634 ntBASIC26.14■■□□□ 1.77
GhdcQ99J23 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
GhdcQ99J23 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.13■■□□□ 1.77
GhdcQ99J23 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.12■■□□□ 1.77
GhdcQ99J23 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.12■■□□□ 1.77
GhdcQ99J23 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
GhdcQ99J23 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
GhdcQ99J23 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
GhdcQ99J23 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
GhdcQ99J23 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
GhdcQ99J23 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
GhdcQ99J23 Gm30023-201ENSMUST00000197970 889 ntBASIC26.09■■□□□ 1.77
GhdcQ99J23 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
GhdcQ99J23 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
GhdcQ99J23 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
GhdcQ99J23 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
GhdcQ99J23 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.05■■□□□ 1.76
GhdcQ99J23 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
GhdcQ99J23 Particl-201ENSMUST00000205370 1560 ntBASIC26.04■■□□□ 1.76
GhdcQ99J23 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms