Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.32■■□□□ 1.32
Pcdhga11Q91XY8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga11Q91XY8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga11Q91XY8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhga11Q91XY8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhga11Q91XY8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhga11Q91XY8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhga11Q91XY8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhga11Q91XY8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Pcdhga11Q91XY8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhga11Q91XY8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga11Q91XY8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdhga11Q91XY8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdhga11Q91XY8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhga11Q91XY8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Pcdhga11Q91XY8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhga11Q91XY8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhga11Q91XY8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga11Q91XY8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhga11Q91XY8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhga11Q91XY8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhga11Q91XY8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhga11Q91XY8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga11Q91XY8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga11Q91XY8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhga11Q91XY8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.21■■□□□ 1.31
Pcdhga11Q91XY8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhga11Q91XY8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhga11Q91XY8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.21■■□□□ 1.31
Pcdhga11Q91XY8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhga11Q91XY8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga11Q91XY8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga11Q91XY8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga11Q91XY8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga11Q91XY8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhga11Q91XY8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhga11Q91XY8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga11Q91XY8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhga11Q91XY8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.16■■□□□ 1.3
Pcdhga11Q91XY8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhga11Q91XY8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhga11Q91XY8 Gm45855-201ENSMUST00000212546 880 ntBASIC23.13■■□□□ 1.29
Pcdhga11Q91XY8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhga11Q91XY8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga11Q91XY8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga11Q91XY8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga11Q91XY8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhga11Q91XY8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
Pcdhga11Q91XY8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhga11Q91XY8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhga11Q91XY8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhga11Q91XY8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdhga11Q91XY8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Pcdhga11Q91XY8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga11Q91XY8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhga11Q91XY8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhga11Q91XY8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhga11Q91XY8 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.06■■□□□ 1.28
Pcdhga11Q91XY8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhga11Q91XY8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga11Q91XY8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga11Q91XY8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhga11Q91XY8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhga11Q91XY8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhga11Q91XY8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhga11Q91XY8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Pcdhga11Q91XY8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhga11Q91XY8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga11Q91XY8 Gm9397-201ENSMUST00000200125 605 ntBASIC23.01■■□□□ 1.27
Pcdhga11Q91XY8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga11Q91XY8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhga11Q91XY8 AC157572.2-201ENSMUST00000226970 908 ntBASIC23■■□□□ 1.27
Pcdhga11Q91XY8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga11Q91XY8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga11Q91XY8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Gm24970-201ENSMUST00000175582 82 ntBASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga11Q91XY8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhga11Q91XY8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga11Q91XY8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Pcdhga11Q91XY8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhga11Q91XY8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga11Q91XY8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms