Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhga9Q91XX9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga9Q91XX9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.16■■□□□ 1.46
Pcdhga9Q91XX9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga9Q91XX9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdhga9Q91XX9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Pcdhga9Q91XX9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga9Q91XX9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhga9Q91XX9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhga9Q91XX9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga9Q91XX9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga9Q91XX9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhga9Q91XX9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.08■■□□□ 1.45
Pcdhga9Q91XX9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhga9Q91XX9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga9Q91XX9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Pcdhga9Q91XX9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga9Q91XX9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga9Q91XX9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga9Q91XX9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga9Q91XX9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga9Q91XX9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhga9Q91XX9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga9Q91XX9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga9Q91XX9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.03■■□□□ 1.44
Pcdhga9Q91XX9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga9Q91XX9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhga9Q91XX9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhga9Q91XX9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.99■■□□□ 1.43
Pcdhga9Q91XX9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhga9Q91XX9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhga9Q91XX9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
Pcdhga9Q91XX9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.98■■□□□ 1.43
Pcdhga9Q91XX9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.98■■□□□ 1.43
Pcdhga9Q91XX9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga9Q91XX9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhga9Q91XX9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhga9Q91XX9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhga9Q91XX9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhga9Q91XX9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhga9Q91XX9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga9Q91XX9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.93■■□□□ 1.42
Pcdhga9Q91XX9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhga9Q91XX9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pcdhga9Q91XX9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga9Q91XX9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga9Q91XX9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhga9Q91XX9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhga9Q91XX9 Gm8503-201ENSMUST00000118131 455 ntBASIC23.89■■□□□ 1.41
Pcdhga9Q91XX9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhga9Q91XX9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhga9Q91XX9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhga9Q91XX9 Gm6821-201ENSMUST00000107540 542 ntBASIC23.88■■□□□ 1.41
Pcdhga9Q91XX9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Pcdhga9Q91XX9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga9Q91XX9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhga9Q91XX9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Pcdhga9Q91XX9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhga9Q91XX9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhga9Q91XX9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Pcdhga9Q91XX9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhga9Q91XX9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.84■■□□□ 1.41
Pcdhga9Q91XX9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdhga9Q91XX9 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.83■■□□□ 1.41
Pcdhga9Q91XX9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhga9Q91XX9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhga9Q91XX9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhga9Q91XX9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pcdhga9Q91XX9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhga9Q91XX9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhga9Q91XX9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.81■■□□□ 1.4
Pcdhga9Q91XX9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhga9Q91XX9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhga9Q91XX9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.79■■□□□ 1.4
Pcdhga9Q91XX9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhga9Q91XX9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhga9Q91XX9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Pcdhga9Q91XX9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhga9Q91XX9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhga9Q91XX9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhga9Q91XX9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhga9Q91XX9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga9Q91XX9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga9Q91XX9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga9Q91XX9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms