Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Swsap1Q8VCI7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Swsap1Q8VCI7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Swsap1Q8VCI7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Swsap1Q8VCI7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Swsap1Q8VCI7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Swsap1Q8VCI7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Swsap1Q8VCI7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Swsap1Q8VCI7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Swsap1Q8VCI7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Swsap1Q8VCI7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Swsap1Q8VCI7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Swsap1Q8VCI7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Swsap1Q8VCI7 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.66■■□□□ 1.06
Swsap1Q8VCI7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Swsap1Q8VCI7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Swsap1Q8VCI7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Swsap1Q8VCI7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Swsap1Q8VCI7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Swsap1Q8VCI7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Swsap1Q8VCI7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.62■■□□□ 1.05
Swsap1Q8VCI7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Swsap1Q8VCI7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Swsap1Q8VCI7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Swsap1Q8VCI7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Swsap1Q8VCI7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Swsap1Q8VCI7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Swsap1Q8VCI7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Swsap1Q8VCI7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.59■■□□□ 1.05
Swsap1Q8VCI7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Swsap1Q8VCI7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Swsap1Q8VCI7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.57■■□□□ 1.04
Swsap1Q8VCI7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Swsap1Q8VCI7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Swsap1Q8VCI7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Swsap1Q8VCI7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Swsap1Q8VCI7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Swsap1Q8VCI7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Swsap1Q8VCI7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Swsap1Q8VCI7 Gm6821-201ENSMUST00000107540 542 ntBASIC21.53■■□□□ 1.04
Swsap1Q8VCI7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.53■■□□□ 1.04
Swsap1Q8VCI7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Swsap1Q8VCI7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.53■■□□□ 1.04
Swsap1Q8VCI7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Swsap1Q8VCI7 Gm8503-201ENSMUST00000118131 455 ntBASIC21.52■■□□□ 1.04
Swsap1Q8VCI7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Swsap1Q8VCI7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Swsap1Q8VCI7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.52■■□□□ 1.03
Swsap1Q8VCI7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Swsap1Q8VCI7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Swsap1Q8VCI7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.5■■□□□ 1.03
Swsap1Q8VCI7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Swsap1Q8VCI7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Swsap1Q8VCI7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Swsap1Q8VCI7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Swsap1Q8VCI7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Swsap1Q8VCI7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Swsap1Q8VCI7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Swsap1Q8VCI7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Swsap1Q8VCI7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Swsap1Q8VCI7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.45■■□□□ 1.02
Swsap1Q8VCI7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Swsap1Q8VCI7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Swsap1Q8VCI7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Swsap1Q8VCI7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Swsap1Q8VCI7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Swsap1Q8VCI7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Swsap1Q8VCI7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Swsap1Q8VCI7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.43■■□□□ 1.02
Swsap1Q8VCI7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.42■■□□□ 1.02
Swsap1Q8VCI7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.42■■□□□ 1.02
Swsap1Q8VCI7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Swsap1Q8VCI7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.41■■□□□ 1.02
Swsap1Q8VCI7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Swsap1Q8VCI7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Swsap1Q8VCI7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Swsap1Q8VCI7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Swsap1Q8VCI7 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.4■■□□□ 1.02
Swsap1Q8VCI7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.39■■□□□ 1.01
Swsap1Q8VCI7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Swsap1Q8VCI7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Swsap1Q8VCI7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Swsap1Q8VCI7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Swsap1Q8VCI7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Swsap1Q8VCI7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Swsap1Q8VCI7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Swsap1Q8VCI7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Swsap1Q8VCI7 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.37■■□□□ 1.01
Swsap1Q8VCI7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Swsap1Q8VCI7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Swsap1Q8VCI7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Swsap1Q8VCI7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Swsap1Q8VCI7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Swsap1Q8VCI7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms