Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nup35Q8R4R6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nup35Q8R4R6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup35Q8R4R6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup35Q8R4R6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup35Q8R4R6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.77■□□□□ 0.76
Nup35Q8R4R6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Nup35Q8R4R6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup35Q8R4R6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup35Q8R4R6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup35Q8R4R6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup35Q8R4R6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup35Q8R4R6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nup35Q8R4R6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup35Q8R4R6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup35Q8R4R6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup35Q8R4R6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.72■□□□□ 0.75
Nup35Q8R4R6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup35Q8R4R6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup35Q8R4R6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup35Q8R4R6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup35Q8R4R6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.71■□□□□ 0.75
Nup35Q8R4R6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup35Q8R4R6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nup35Q8R4R6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup35Q8R4R6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup35Q8R4R6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nup35Q8R4R6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup35Q8R4R6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup35Q8R4R6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup35Q8R4R6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup35Q8R4R6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup35Q8R4R6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup35Q8R4R6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nup35Q8R4R6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup35Q8R4R6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.66■□□□□ 0.74
Nup35Q8R4R6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nup35Q8R4R6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nup35Q8R4R6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup35Q8R4R6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup35Q8R4R6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup35Q8R4R6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup35Q8R4R6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup35Q8R4R6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup35Q8R4R6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup35Q8R4R6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup35Q8R4R6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup35Q8R4R6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup35Q8R4R6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nup35Q8R4R6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup35Q8R4R6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup35Q8R4R6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup35Q8R4R6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.6■□□□□ 0.73
Nup35Q8R4R6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup35Q8R4R6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup35Q8R4R6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup35Q8R4R6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup35Q8R4R6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nup35Q8R4R6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup35Q8R4R6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup35Q8R4R6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup35Q8R4R6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup35Q8R4R6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nup35Q8R4R6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup35Q8R4R6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup35Q8R4R6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup35Q8R4R6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nup35Q8R4R6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup35Q8R4R6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup35Q8R4R6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup35Q8R4R6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup35Q8R4R6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup35Q8R4R6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nup35Q8R4R6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.51■□□□□ 0.71
Nup35Q8R4R6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup35Q8R4R6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup35Q8R4R6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup35Q8R4R6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup35Q8R4R6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup35Q8R4R6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup35Q8R4R6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup35Q8R4R6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup35Q8R4R6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms