Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
Atf7Q8R0S1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.96■■■□□ 2.23
Atf7Q8R0S1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Atf7Q8R0S1 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.95■■■□□ 2.23
Atf7Q8R0S1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Atf7Q8R0S1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Atf7Q8R0S1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.94■■■□□ 2.22
Atf7Q8R0S1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atf7Q8R0S1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Atf7Q8R0S1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.93■■■□□ 2.22
Atf7Q8R0S1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atf7Q8R0S1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atf7Q8R0S1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.91■■■□□ 2.22
Atf7Q8R0S1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atf7Q8R0S1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Atf7Q8R0S1 Gm24970-201ENSMUST00000175582 82 ntBASIC28.9■■■□□ 2.22
Atf7Q8R0S1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Atf7Q8R0S1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.89■■■□□ 2.22
Atf7Q8R0S1 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.88■■■□□ 2.21
Atf7Q8R0S1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Atf7Q8R0S1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Atf7Q8R0S1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.85■■■□□ 2.21
Atf7Q8R0S1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
Atf7Q8R0S1 Gm45855-201ENSMUST00000212546 880 ntBASIC28.84■■■□□ 2.21
Atf7Q8R0S1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.84■■■□□ 2.21
Atf7Q8R0S1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.84■■■□□ 2.21
Atf7Q8R0S1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Atf7Q8R0S1 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.83■■■□□ 2.21
Atf7Q8R0S1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Atf7Q8R0S1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Atf7Q8R0S1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Atf7Q8R0S1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Atf7Q8R0S1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Atf7Q8R0S1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Atf7Q8R0S1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Atf7Q8R0S1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Atf7Q8R0S1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Atf7Q8R0S1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Atf7Q8R0S1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.76■■■□□ 2.19
Atf7Q8R0S1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Atf7Q8R0S1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Atf7Q8R0S1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Atf7Q8R0S1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Atf7Q8R0S1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Atf7Q8R0S1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Atf7Q8R0S1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Atf7Q8R0S1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Atf7Q8R0S1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Atf7Q8R0S1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
Atf7Q8R0S1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Atf7Q8R0S1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.69■■■□□ 2.18
Atf7Q8R0S1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Atf7Q8R0S1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Atf7Q8R0S1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.69■■■□□ 2.18
Atf7Q8R0S1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Atf7Q8R0S1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Atf7Q8R0S1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Atf7Q8R0S1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Atf7Q8R0S1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Atf7Q8R0S1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.66■■■□□ 2.18
Atf7Q8R0S1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.66■■■□□ 2.18
Atf7Q8R0S1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.65■■■□□ 2.18
Atf7Q8R0S1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Atf7Q8R0S1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Atf7Q8R0S1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Atf7Q8R0S1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Atf7Q8R0S1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Atf7Q8R0S1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Atf7Q8R0S1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Atf7Q8R0S1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Atf7Q8R0S1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Atf7Q8R0S1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Atf7Q8R0S1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Atf7Q8R0S1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Atf7Q8R0S1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Atf7Q8R0S1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Atf7Q8R0S1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Atf7Q8R0S1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Atf7Q8R0S1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Atf7Q8R0S1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Atf7Q8R0S1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Atf7Q8R0S1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Atf7Q8R0S1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atf7Q8R0S1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Atf7Q8R0S1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.49■■■□□ 2.15
Atf7Q8R0S1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Atf7Q8R0S1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.47■■■□□ 2.15
Atf7Q8R0S1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atf7Q8R0S1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atf7Q8R0S1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atf7Q8R0S1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Atf7Q8R0S1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Atf7Q8R0S1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Atf7Q8R0S1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atf7Q8R0S1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.42■■■□□ 2.14
Atf7Q8R0S1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atf7Q8R0S1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Atf7Q8R0S1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.41■■■□□ 2.14
Atf7Q8R0S1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Atf7Q8R0S1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms