Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Clrn1Q8K445 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Clrn1Q8K445 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
Clrn1Q8K445 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Clrn1Q8K445 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Clrn1Q8K445 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Clrn1Q8K445 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Clrn1Q8K445 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Clrn1Q8K445 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Clrn1Q8K445 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Clrn1Q8K445 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Clrn1Q8K445 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Clrn1Q8K445 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Clrn1Q8K445 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn1Q8K445 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Clrn1Q8K445 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Clrn1Q8K445 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.88■■□□□ 1.25
Clrn1Q8K445 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Clrn1Q8K445 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Clrn1Q8K445 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.87■■□□□ 1.25
Clrn1Q8K445 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Clrn1Q8K445 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.86■■□□□ 1.25
Clrn1Q8K445 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn1Q8K445 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn1Q8K445 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn1Q8K445 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Clrn1Q8K445 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Clrn1Q8K445 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.84■■□□□ 1.25
Clrn1Q8K445 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Clrn1Q8K445 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Clrn1Q8K445 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Clrn1Q8K445 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
Clrn1Q8K445 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.82■■□□□ 1.24
Clrn1Q8K445 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Clrn1Q8K445 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Clrn1Q8K445 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Clrn1Q8K445 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Clrn1Q8K445 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Clrn1Q8K445 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.79■■□□□ 1.24
Clrn1Q8K445 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Clrn1Q8K445 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Clrn1Q8K445 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Clrn1Q8K445 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Clrn1Q8K445 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Clrn1Q8K445 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.76■■□□□ 1.23
Clrn1Q8K445 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Clrn1Q8K445 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Clrn1Q8K445 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Clrn1Q8K445 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Clrn1Q8K445 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Clrn1Q8K445 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.73■■□□□ 1.23
Clrn1Q8K445 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Clrn1Q8K445 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.72■■□□□ 1.23
Clrn1Q8K445 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Clrn1Q8K445 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Clrn1Q8K445 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn1Q8K445 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Clrn1Q8K445 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.68■■□□□ 1.22
Clrn1Q8K445 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Clrn1Q8K445 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Clrn1Q8K445 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Clrn1Q8K445 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Clrn1Q8K445 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Clrn1Q8K445 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clrn1Q8K445 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Clrn1Q8K445 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Clrn1Q8K445 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Clrn1Q8K445 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Clrn1Q8K445 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.64■■□□□ 1.21
Clrn1Q8K445 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Clrn1Q8K445 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clrn1Q8K445 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.63■■□□□ 1.21
Clrn1Q8K445 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Clrn1Q8K445 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Clrn1Q8K445 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.62■■□□□ 1.21
Clrn1Q8K445 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Clrn1Q8K445 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.61■■□□□ 1.21
Clrn1Q8K445 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clrn1Q8K445 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Clrn1Q8K445 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Clrn1Q8K445 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.61■■□□□ 1.21
Clrn1Q8K445 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Clrn1Q8K445 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clrn1Q8K445 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.59■■□□□ 1.21
Clrn1Q8K445 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Clrn1Q8K445 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Clrn1Q8K445 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Clrn1Q8K445 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Clrn1Q8K445 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clrn1Q8K445 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Clrn1Q8K445 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Clrn1Q8K445 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clrn1Q8K445 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Clrn1Q8K445 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Clrn1Q8K445 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms